Topics & Programme
The scientific program will include different scientific domains of life sciences. Invited speakers at this congress are recognized as international and national leaders. They will present the state of the art of the so called “omics” sciences (such as genomic, transcriptomics, proteomics, metabolomics, …) scientific approaches developped in their laboratories, searching for biomarkers and also understanding major biological functions.
Pre Congress
Monday,
October
6 : 9h00 -
11h00 : SFEAP
Young club
Monday, October 6
14h00 : Participants
welcome and posters set up
15h15 : Opening of
the
congress
Chair: Thierry Rabilloud
15h45 :
Gabriel Peltre,
Ecole
Supérieure de Physique et Chimie Industrielles
(ESPCI), LECA, Allergie et Environnement, Paris
"Il y a 25
ans la SFE!"
16h25 :
"Past, present and future of gel-based proteomics"
17h05 :
"Protein methylations
and modifications in the biology of human disease"
18h15 - 20h: Welcome
drink at Tours city hall
Tuesday, October 7
8h00 : Participants
welcome and posters set up
Chair: Hubert
Hondemarck
8h30 : Michael
Primig, Unité
INSERM U625, Rennes
"Towards total transcript profiling of meiosis and gametogenesis"
9h05 : Pierre
Lescuyer, Biomedical
Proteomics Research Group, Department of Bioinformatics and Structural
Biology, Geneva University, Geneva, Switzerland
"Découverte de nouveaux biomarqueurs de pathologies : quelle place pour la protéomique?"
9h40 : Joëlle
Vinh, Ecole
Supérieure de Physique et Chimie Industrielles (ESPCI), Paris
"Study of complex samples using multiple analytical dimensions: optimization of nanoLC-MALDI orbitrap and evaluation of complementary configurations"
10h00 : Coffee
break (offered by ThermoFisher),
poster meetings
Chair: Bernard
Monsarrat
10h45 : Jérôme
Lemoine, UMR 5180 Sciences Analytiques,
Université de Lyon, Lyon1
"Clinical quantification of prostate specific biomarker in the low nanogram/mL range mass spectrometry coupled to conventional bore chromatography"
11h05 : Clara
F. Burande,
Institut de Pharmacologie et Biologie
Structurale, Toulouse
"A quantitative proteomic strategy to identify novel E3, ubiquitin ligase substrates targeted to proteasome, degradation: identification of ASB2 targets, in myeloid leukemia cells"
11h25 : Christophe
Masselon, CEA, DSV, iRTSV, Laboratoire d’Etude de la
Dynamique des Protéomes, Grenoble
"Quantitative proteomic analyses of laser microdissected cholangiocarcinoma cells: an integrated AMT tag label free approach"
11h45 : Xavier
Gidrol, CEA, iBEB, Laboratoire d’Exploration
Fonctionnelle des Génomes, Evry
"Genome-wide screen using siRNA microarrays, to characterize kinases involved in the phosphorylation of histone H2AX in human keratinocytes"
12h20 : Lunch in Agnès Sorel
room
Chair: Pascal
Cosette
14h00 : Michael
Hecker, Ernst-Moritz-Arndt-Universität
Greifswald, Institut für Mikrobiologie, Greifswald, Germany
"Towards the entire proteome of Staphylococcus aureus"
14h40 :
Jean
Armengaud, CEA VALRHO, DSV, iBEB, SBTN,
LBSP, Service de Biochimie et Toxicologie Nucléaire, Marcoule
"Le MICMAC
des OMICs : l’alliance
de ProteOMICs et GenOMICs
pour identifier la trousse de secours de la bactérie exotique Deinococcus deserti"
15h15 : Frédéric
Halgand, UMR 6175, INRA – CNRS, Tours
"Using
Top down mass spectrometry to reveal protein, polymorphism, to map
biological active sites and decipher membrane protein properties"
15h35 :
Coffee break (Agrobio participation),
poster meetings
Chair:
Hélian Boucherie
16h15:
Jean
Labarre, CEA/DSV/iBiTec-S, Saclay,
Gif sur Yvette
"Couplage
des analyses protéomiques et métabolomiques
pour l¹analyse du métabolisme soufré chez la levure"
16h50 : Norbert
Rolland, Laboratoire de Physiologie
Cellulaire Végétale /UMR5168
CNRS CEA UJF INRA, Grenoble
"Recent
surprises deriving from subcellular proteomic analyses targeted to the
chloroplasts and their subfractions"
17h25 : Valérie
Labas, Plate-forme de
Protéomique Analytique et Fonctionnelle – INRA Tours
"Spermatozoa
fertility biomarkers display by intact cells MALDI-TOF mass
spectrometry (ICM-MS)"
17h45 : Michel
Salzet, MALDI Imaging Team,
FRE-CNRS 2933, Lille
"MALDI
Imaging TODAY! Key developments for the future in pathological
proteomic"
18h05 -19h00 : SFEAP
Association meeting
19h30 : Gala dinner
Wednesday, October 8
8h00 : Participants
welcome
Chair:
Jean-Jacques Diaz
8h30 :
Kathryn Lilley,
"Mapping
the organelle proteome"
9h10 : Jens Andersen, CEBI -
Center for Eksperimentel
Bioinformatik Denmark
"Mass
spectrometry-based proteomics of cell organelles and signaling networks"
9h50 :
Coffee break,
poster meetings
Chair:
Dominique Job
10h30 : Heribert Hirt,
“Génomique végétale” INRA–CNRS–Université
d’Evry
"Integrating
transcriptome, metabolome and phosphoproteomic approaches in stress
signal transduction"
11h05 : Julie
Augier, Institut
de Génomique Fonctionnelle, INSERM U661, CNRS UMR5203,
Universités Montpellier
"Quantitative
analysis of IGF-1-associated phosphoproteome in cultured cortical
neurons using SILAC"
11h25 : Julie
Catusse, CNRS
/Bayer CropScience joint laboratory (UMR 5240)
"Proteome-wide
characterization of sugarbeet seed vigor and its tissue specific
expression"
12h00 : Lunch in Agnès Sorel room
Chair: Odile
Schiltz
13h30 : John S. Cottrell, Matrix
Science,
"An
integrated approach to protein identification and quantitation"
14h10 : Pierre-Alain Binz, Institut
Suisse de Bioinformatique, Genève
"Validation
approaches in protein identification with Phenyx: not only FDR"
14h30 : Hélène Rognaux, INRA, UR
1268, Nantes
"OVNIp:
an open-source application facilitating the critical examination of
identified proteins in proteomics, their validation and their edition"
14h50 :
Coffee break, poster meetings
Chair: Antoine
de Daruvar
15h10 :
Ioannis Xenarios, Swiss
institute of Bioinformatic, Vital-IT Group, Lausanne, Suisse
"Integration
of biological knowledge: from avalanche of data to system modelling"
15h40 :
Henning Hermjakob, EMBL Outstation, European
Bioinformatics
Institute, Wellcome Trust Genome Campus, Hinxton,
"The
HUPO Proteomics
Standards Initiative - Overcoming the fragmentation of proteomics data"
16h20 : Posters
awards recognition session and selected poster
presentation
16h30 : End
of the congress